Service Composition for Biomedical Applications

Finally finished my PhD! My research work is entitled Service Composition for Biomedical Applications and here’s my public keynote! Open publication - Free publishing - More bioinformatics  Read More

Dr. Knowledge Or: I Stopped Worrying and Love the Semantic Web

Relaxed keynote for the bioinformatics research group COEUS lab meeting. Semantic Web intro + COEUS Open publication - Free publishing - More coeus  Read More

Towards Knowledge Federation for Biomedical Applications

Towards Knowledge Federation for Biomedical Applications Pedro Lopes & José Luís Oliveira DOI: 10.1145/2063518.2063530 I-Semantics 2011, 7th International Conference on Semantic Systems; September 2011 – Graz, Austria Open publication - Free publishing - More semantic Abstract: Knowledge federation is a particular matter of concern in the life sciences domain. The magnitude of data generated by biomedical software and hardware since... Read More

ISCB SCS 2011

A knowledge federation strategy for integrating genotype-to-phenotype data July 15 – Vienna, Austria  Read More

LSDB Connector

Create a “semi-manual” LSDB integration engine, using Arabella crawler to gather links and HGVS list as a base. Do some case-by-case work and convert to a pseudo-LRG format. Having the data mined and categorized would enable a search mechanism among variations: inclusion in GeneBrowsers as an API and the creation a simple variation search engine.  Read More

From Genotype to Phenotype

Future perspectives on Data and Service Integration Keynote for the Bioinformatics course of my doctoral programme Open publication - Free publishing - More web2.0  Read More