Pedro Jorge Pereira Lopes

Pedrolopes.net

Bioinformatics Research & Development
Computer Science PhD Student

Rua Jose Pinto Bastos, N. 11, 1. Dir

3830 –205 Ilhavo
Aveiro
Portugal

+351964725284

GMail

COEUS

COEUS Semantic Web Application Framework Ipsa scientia potestas est. Knowledge itself is power. Next-generation Semantic Web Application Framework. “Semantic Web in a box” http://bioinformatics.ua.pt/coeus/  Read More

WAVe database model

First stable version of the database model is complete. Upcoming issues: how to crawl the databases to get the variants where is GEN2PHEN lsdb listing how to get variation metadata like publications and so on, will a specific parser for each database be required? develop the final app in C# or Java? C# would be faster… Java stripes? WAVe database model 0.1  Read More

HTTP Secure Connection with WSO2 WSAS

At the UA.PT Bioinformatics research group we were required to implement a secure web services provider for the eu-ADR project. For the service provider module we picked the WSO2 WSAS framework, which implements various methods of security, including WS-Security over HTTPS (what we wanted in the beginning). Being inside a public institution, we need to request a certificate to our university computational centre. After the creation of the certificate... Read More

BioCappuccino

Cappuccino is the first Objective-J framework. It is a Javascript framework that eases the process of creating RIA. 280slides is the first example of applications built in cappuccino. Cappuccino can be connected to Java web services allowing the development of applications involving both client and server side components. BioCappuccino could be used to migrate trivial desktop applications to the web environment or promote the creation of new solutions.  Read More